Fitness data for Atu4512 in Agrobacterium fabrum C58

myo-inositol catabolism IolC protein
SEED: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) / uncharacterized domain
KEGG: 5-dehydro-2-deoxygluconokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source m-Inositol (C) -3.2 -14.4 compare
carbon source m-Inositol (C) -3.0 -14.5 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -2.0 compare
stress Chloramphenicol 12.5 ug/mL -0.4 -2.2 compare
in planta Bethi_Library_OD0.05 -0.4 -3.0 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -2.0 compare
in planta Bethi_Library_OD0.5_6week -0.4 -2.5 compare
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -2.1 compare
stress Streptomycin 200 ug/mL -0.3 -2.1 compare
lb_lettuce_leaf LB_Lettuce_Leaf +0.3 +2.5 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +1.9 compare
phage AgroPhage_F10 +0.4 +1.8 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.1 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +2.6 compare
phage AgroPhage_F04 +0.4 +2.1 compare
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +1.9 compare
phage AgroPhage_B07 +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.1 compare
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.0 compare