Fitness data for Atu4041 in Agrobacterium fabrum C58

ribosomal large subunit pseudouridine synthase A
SEED: Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -2.7 compare
stress R2A with Vancomycin 0.009 mM -0.9 -2.1 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 -2.2 compare
stress R2A with Vancomycin 0.009 mM -0.7 -2.9 compare
no phage P2L5 -0.7 -2.6 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -1.7 compare
stress R2A with Tetracycline 0.002 mM -0.6 -2.5 compare
carbon source D-Raffinose (C) -0.6 -2.3 compare
carbon source Propan-1-ol (C) -0.6 -2.3 compare
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -1.5 compare
carbon source 4-Hydroxybenzoic Acid (C) -0.5 -2.4 compare
nitrogen source Choline chloride (N) +0.5 +2.6 compare
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +1.6 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +2.5 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.6 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.6 compare
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 +1.5 compare