Fitness data for Atu0219 in Agrobacterium fabrum C58

components of type IV pilus
SEED: Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly
KEGG: pilus assembly protein CpaE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Xylose (C) -0.6 -3.6 compare
carbon source Stachyose (C) -0.6 -3.8 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.8 compare
stress Chloramphenicol 12.5 ug/mL -0.5 -2.5 compare
carbon source D-Xylose (C) -0.5 -3.7 compare
nitrogen source Betaine (N) -0.4 -3.2 compare
stress R2A with Bacitracin 0.6 mM -0.4 -2.5 compare
carbon source D-Quinic (C) -0.4 -2.7 compare
stress Erythromycin 12.5 ug/mL -0.4 -2.3 compare
carbon source D-Glucose (C) -0.4 -2.8 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.7 compare
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +2.2 compare
stress R2A with Vancomycin 0.009 mM +0.4 +2.6 compare
stress R2A with Vancomycin 0.009 mM +0.4 +1.9 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +1.4 compare
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +1.2 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +1.7 compare
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +2.4 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +2.8 compare