Fitness data for Atu0216 in Agrobacterium fabrum C58

components of type IV pilus
SEED: Type II/IV secretion system protein TadC, associated with Flp pilus assembly
KEGG: tight adherence protein C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -2.1 compare
carbon source Stachyose (C) -0.6 -2.7 compare
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -2.1 compare
carbon source Protocatechuic Acid (C) -0.5 -2.6 compare
phage AgroPhage_D04 -0.5 -1.7 compare
carbon source D-Xylose (C) -0.4 -2.4 compare
stress Chloramphenicol 12.5 ug/mL -0.4 -1.9 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.8 compare
phage phage 95.1 -0.4 -1.8 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +1.6 compare
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +1.6 compare
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +2.1 compare
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 +2.7 compare
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +1.3 compare
carbon source methyl-alpha-D-xylopyranoside (C) +0.4 +1.1 compare
nitrogen source DL-2-Aminobutyric (N) +0.5 +1.6 compare
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +2.1 compare
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +2.4 compare
stress R2A with Vancomycin 0.009 mM +0.7 +4.0 compare
stress R2A with Vancomycin 0.009 mM +1.0 +5.9 compare