Fitness data for ABID97_RS28365 in Variovorax sp. OAS795

ABC transporter substrate-binding protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -1.1 compare
r2a outgrowth control R2A outgrowth control -0.5 -1.5 compare
r2a outgrowth control R2A outgrowth control -0.5 -2.2 compare
plant outgrowth control Plant outgrowth control -0.4 -1.9 compare
carbon source D-Gluconic Acid (C) -0.4 -1.2 compare
plant outgrowth control Plant outgrowth control -0.3 -0.9 compare
carbon source acetate (C) -0.3 -1.2 compare
phage V2_1 -0.3 -1.5 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.4 compare
carbon source Gly-Glu (C) -0.3 -1.5 compare
carbon source L-Asparagine (C) -0.3 -1.0 compare
carbon source L-tyrosine (C) -0.3 -0.6 compare
carbon source D-Serine (C) -0.3 -1.0 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.1 compare
carbon source D-Fructose (C) +0.3 +1.3 compare
carbon source Fumarate (C) +0.3 +1.3 compare
carbon source butyrate (C) +0.3 +0.9 compare
carbon source casaminos (C) +0.4 +1.8 compare
carbon source L-Arabinose (C) +0.4 +1.8 compare
carbon source L-Alanine (C) +0.5 +1.2 compare