Fitness data for ABID97_RS26605 in Variovorax sp. OAS795

sigma-54 dependent transcriptional regulator
SEED: Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake
KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Malic (C) -3.1 -3.0 compare
carbon source L-Malic (C) -2.9 -3.2 compare
carbon source L-tyrosine (C) -2.9 -1.6 compare
carbon source Fumarate (C) -2.3 -2.3 compare
carbon source Fumarate (C) -2.0 -2.7 compare
carbon source succinate (C) -1.9 -2.9 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 -1.5 compare
carbon source succinate (C) -1.6 -2.3 compare
r2a outgrowth control R2A outgrowth control -1.2 -1.7 compare
carbon source L-Asparagine (C) -0.9 -1.4 compare
carbon source Ethanol (C) -0.9 -1.2 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -1.0 compare
carbon source D,L-Malic Acid (C) -0.7 -0.8 compare
phage V2_10 -0.7 -0.8 compare
carbon source Ethanol (C) -0.6 -0.9 compare
carbon source L-tyrosine (C) -0.6 -1.0 compare
carbon source D,L-Malic Acid (C) +0.6 +1.4 compare
carbon source a-Ketoglutaric (C) +0.7 +1.6 compare
carbon source L-Arabinose (C) +0.7 +0.7 compare
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +1.3 compare