Fitness data for ABID97_RS12930 in Variovorax sp. OAS795

Hcp family type VI secretion system effector
SEED: Hcp
KEGG: type VI secretion system secreted protein Hcp

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -2.6 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -1.8 compare
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.6 compare
phage V2_10 -0.5 -1.6 compare
phage V1_1 -0.4 -2.6 compare
phage V1_1 -0.4 -1.9 compare
carbon source L-Glutamic (C) +0.4 +2.4 compare
carbon source Ethanol (C) +0.4 +1.7 compare
carbon source D-Glucose (C) +0.4 +1.7 compare
carbon source acetate (C) +0.4 +2.1 compare
carbon source 2-Deoxy-D-Ribose (C) +0.4 +2.0 compare
carbon source L-Histidine (C) +0.5 +1.7 compare
carbon source butyrate (C) +0.5 +1.8 compare
carbon source Glycerol (C) +0.5 +3.4 compare
r2a outgrowth control R2A outgrowth control +0.5 +2.2 compare
carbon source succinate (C) +0.5 +2.2 compare
carbon source Ethanol (C) +0.6 +2.1 compare
carbon source butyrate (C) +0.7 +2.3 compare
carbon source L-Alanine (C) +0.7 +3.1 compare
carbon source D,L-Malic Acid (C) +0.7 +2.7 compare