Fitness data for ABI39_RS08620 in Phocaeicola dorei CL03T12C01

RNA polymerase sigma-70 factor
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.8 -2.8 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.6 -2.0 compare
carbon source Starch soluble; autoclaved 2.5 mg/ml (C) -0.6 -1.6 compare
carbon source Xylan from Beechwood; autoclaved 2.5 mg/ml (C) -0.6 -1.5 compare
carbon source Beta-Lactose 2.5 mg/ml (C) -0.6 -2.1 compare
carbon source amylopectin from maize; autoclaved 2.5 mg/ml (C) -0.5 -1.2 compare
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.5 -1.2 compare
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -0.5 -1.6 compare
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.5 -1.3 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen -0.5 -1.7 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.5 -1.9 compare
carbon source Amylopectin from Potato; autoclaved 2.5 mg/ml (C) -0.4 -0.9 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.4 -1.9 compare
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.4 +2.2 compare
carbon source Galactan from Potato (C) +0.5 +1.3 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.5 +1.5 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) +0.5 +1.6 compare
carbon source b-Glucan from Beet (1,2-b-Glucan); filtered 2.5 mg/ml (C) +0.5 +2.2 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) +0.6 +1.3 compare
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) +0.8 +2.2 compare