Fitness data for ABI39_RS03560 in Phocaeicola dorei CL03T12C01

RNA polymerase sigma factor
SEED: putative RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -1.9 -1.5 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -1.2 -1.5 compare
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -1.0 -1.7 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -1.0 -1.9 compare
carbon source Galactan from Potato; autoclaved 2.5 mg/ml (C) -1.0 -1.3 compare
carbon source amylopectin from maize (C) -0.9 -1.1 compare
carbon source Galactan from Potato (C) -0.9 -1.1 compare
carbon source Galactan from Potato; filtered 2.5 mg/ml (C) -0.8 -1.2 compare
carbon source Pectic galactan from potato; filtered 2.5 mg/ml (C) -0.7 -0.9 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.7 -1.5 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.6 -1.2 compare
carbon source Pectin from apple; filtered 1 mg/ml (C) -0.6 -1.6 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre; filtered 2.5 mg/ml (C) -0.6 -1.3 compare
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.6 +2.6 compare
carbon source NAG 2.5 mg/ml (C) +0.7 +2.8 compare
carbon source NAG 2.5 mg/ml (C) +0.8 +2.8 compare
carbon source b-Glucan from Beet (1,2-b-Glucan) (C) +0.8 +1.6 compare
nitrogen source L-Glutamic (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.9 +1.2 compare
carbon source Beta-Lactose 2.5 mg/ml (C) +0.9 +2.7 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.9 +1.8 compare