Fitness data for b4378 in Escherichia coli BW25113

yjjV: predicted DNase (NCBI)
SEED: Putative deoxyribonuclease YjjV
KEGG: TatD DNase family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
stress Aluminum chloride 5 mM -1.1 -2.9 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -1.1 -3.4 compare
predation 6 hr rep2_HD100_10fold_dilution_grewON -1.0 -2.2 compare
carbon source carbon source D-Glucose 0.25mM -0.9 -1.6 compare
stress LB Aerobic with Nitrofurantoin 0.00003125 mM -0.9 -2.6 compare
motility outer cut, LB soft agar motility assay -0.8 -1.9 compare
phage R1_N4_T2_phage8 -0.8 -1.5 compare
control PBS_cage_1_mouse_1_Cecum_40 hr -0.7 -1.2 compare
stress Trimethoprim 0.005 mM -0.6 -2.9 compare
control PBS_cage_2_mouse_1_Cecum_40 hr -0.6 -1.4 compare
stress LB Anaerobic with Chloramphenicol 0.000001953125 mM -0.6 -2.3 compare
phage N4_phage 0.0009375 MOI TC2 -0.6 -1.5 compare
gfp_control GFP_control +0.5 +1.4 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.6 +2.0 compare
predation 3 hr rep1_HD100_100fold_dilution +0.6 +2.1 compare
carbon source carbon source D-Mannose 5mM +0.6 +1.1 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.6 +2.2 compare
motility inner cut, LB soft agar motility assay +0.6 +1.4 compare
phage Ste41 +0.7 +1.7 compare
phage Papa dilution 10-1 cacl2 maltose +0.8 +3.5 compare