Fitness data for b4257 in Escherichia coli BW25113

yjgN: conserved inner membrane protein (NCBI)
SEED: Inner membrane protein YjgN

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
plasmid transformation vcDART vector transformation; liquid outgrowth assay -1.0 -3.6 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.9 -3.1 compare
stress Cisplatin 0.1 mg/ml -0.8 -3.1 compare
stress LB Anaerobic with Amoxicillin 0.0000078125 mM -0.8 -2.7 compare
phage T7_phage 0.0015625 MOI TC1 -0.7 -2.4 compare
control PBS_cage_2_mouse_1_Cecum_40 hr -0.7 -1.6 compare
phage R1_N4_T2_phage8 -0.7 -1.6 compare
control PBS_cage_2_mouse_3_Cecum_40 hr -0.7 -2.1 compare
stress Benzalkonium Chloride 0.004 mg/ml -0.7 -2.5 compare
stress 1-ethyl-3-methylimidazolium chloride 40 mM -0.6 -3.3 compare
motility outer cut, LB soft agar motility assay -0.6 -1.6 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.5 -2.2 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan -0.5 -3.0 compare
phage Ste41 +0.5 +1.5 compare
phage RB68 +0.6 +3.1 compare
control PBS_cage_1_mouse_1_Cecum_40 hr +0.6 +1.5 compare
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr +0.7 +1.9 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.7 +2.0 compare
control PBS_cage_1_mouse_2_Cecum_40 hr +0.7 +1.8 compare
stress octanol 0.08 vol% +0.9 +2.6 compare