Fitness data for b4485 in Escherichia coli BW25113

ytfR: predicted sugar transporter subunit: ATP-binding component of ABC superfamily (NCBI)
SEED: Putative sugar ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17)
KEGG: simple sugar transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage Ste41 -0.7 -1.4 compare
stress Cisplatin 0.1 mg/ml -0.6 -1.8 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.6 -1.7 compare
carbon source D-Glucosamine Hydrochloride (C) -0.6 -2.2 compare
stress Benzalkonium Chloride 0.004 mg/ml -0.5 -1.6 compare
predation 48 hr rep3_Tiberius_10fold_dilution -0.5 -3.3 compare
stress Cisplatin 0.05 mg/ml -0.5 -2.3 compare
stress LB Aerobic with Spiramycin 0.0000625 mM -0.5 -1.8 compare
control PBS_cage_2_mouse_3_Cecum_40 hr +0.5 +1.4 compare
carbon source D-Serine (C) +0.5 +1.1 compare
stress pinene 5 vol% +0.5 +2.3 compare
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.5 +1.6 compare
stress LB Anaerobic with Amoxicillin 0.0000078125 mM +0.5 +1.3 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.5 +1.0 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.5 +1.6 compare
stress LB Anaerobic with Amoxicillin 0.0000078125 mM +0.5 +1.2 compare
phage T7_phage 0.00015625 MOI TC4 +0.6 +2.0 compare
stress octanol 0.08 vol% +0.8 +2.2 compare
stress Irgasan 0.0024 mM +0.8 +1.3 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.8 +2.4 compare