Fitness data for b4264 in Escherichia coli BW25113

idnR: DNA-binding transcriptional repressor, 5-gluconate-binding (NCBI)
SEED: Positive regulator of L-idonate catabolism
KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source carbon source D-Mannose 5mM -1.0 -3.6 compare
carbon source Guanosine 0.35306 mM (C) -0.4 -2.7 compare
retron_ec_48_control retron_Ec_48_control -0.4 -2.5 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.4 -1.6 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.3 -1.4 compare
drt_type_3 DRT_type_3 -0.3 -2.0 compare
drt_type_3 DRT_type_3 -0.3 -1.9 compare
mzaabcde mzaABCDE -0.3 -1.6 compare
gfp_control GFP_control -0.3 -1.5 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.3 -1.3 compare
carbon source a-Ketoglutaric (C) -0.3 -1.8 compare
motility outer cut, LB soft agar motility assay +0.3 +1.3 compare
stress methylglyoxal 0.008 vol% +0.3 +1.9 compare
stress acetate 70 mM +0.3 +2.2 compare
control PBS_cage_2_mice _Feces_40 hr +0.3 +1.3 compare
phage TP4 +0.3 +1.7 compare
control PBS_cage_2_mouse_1_Cecum_40 hr +0.3 +1.1 compare
stress LB Anaerobic with Cephalothin 0.0000078125 mM +0.3 +1.8 compare
stress Spectinomycin 0.0125 mg/ml +0.3 +2.7 compare
stress Cisplatin 0.1 mg/ml +0.5 +3.0 compare