Fitness data for b3661 in Escherichia coli BW25113

nlpA: cytoplasmic membrane lipoprotein-28 (NCBI)
SEED: Methionine ABC transporter substrate-binding protein
KEGG: D-methionine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source carbon source D-Glucose 0.25mM -0.5 -2.5 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.4 -2.6 compare
phage Δdbn_10 -0.4 -1.8 compare
plasmid transformation vcDART vector transformation; agar assay -0.3 -2.7 compare
plasmid transformation mariner vector transformation; agar assay -0.3 -2.4 compare
nophagecontrol T4_T2_phage0 -0.3 -2.2 compare
plasmid transformation vcDART vector transformation; agar assay -0.3 -2.3 compare
plasmid transformation vcDART vector transformation; agar assay -0.3 -2.3 compare
plasmid transformation mariner vector transformation; agar assay -0.3 -2.2 compare
carbon source carbon source D-Mannose 1mM -0.3 -1.6 compare
phage R2_N4_T1_phage10 -0.2 -1.7 compare
stress LB Aerobic with Nitrofurantoin 0.00003125 mM -0.2 -1.7 compare
plasmid transformation mariner vector transformation; agar assay -0.2 -2.2 compare
stress LB Aerobic with Spiramycin 0.0000625 mM -0.2 -2.0 compare
gfp_control GFP_control +0.2 +1.7 compare
phage Phage_N4_cage_3_mice _Feces_16 hr +0.2 +1.9 compare
phage Phage_N4_cage_3_mouse_2_Cecum_40 hr +0.3 +2.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.3 +1.6 compare
stress LB Aerobic with Irgasan 0.0000003125 mM +0.3 +2.4 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.3 +2.2 compare