Fitness data for b2984 in Escherichia coli BW25113

yghR: predicted protein with nucleoside triphosphate hydrolase domain (NCBI)
SEED: Conserved protein YghR, with nucleoside triphosphate hydrolase domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
control PBS_cage_1_mice _Feces_16 hr -1.0 -3.0 compare
control PBS_cage_1_mice _Feces_22 hr -1.0 -3.1 compare
control PBS_cage_1_mice _Feces_40 hr -0.8 -2.7 compare
phage T7_phage 0.0015625 MOI TC2 -0.8 -1.2 compare
phage Δdbn_10 -0.7 -1.6 compare
control PBS_cage_1_mouse_2_Cecum_40 hr -0.7 -1.8 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.7 -2.6 compare
stress LB Aerobic with 8-hydroxy-nitroquinoline 0.00000125 mM -0.7 -3.8 compare
stress Benzalkonium Chloride 0.004 mg/ml -0.6 -1.5 compare
carbon source Dodecanol and Rhamnolipid (C) -0.5 -2.0 compare
gfp_control GFP_control -0.5 -2.2 compare
stress LB Anaerobic with Furaltadone 0.000015625 mM -0.5 -1.7 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.5 -1.4 compare
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM -0.5 -2.5 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.4 -1.3 compare
carbon source D-Serine (C) -0.4 -2.2 compare
stress LB Aerobic with Zinc Pyrithione 0.00000125 mM -0.4 -2.4 compare
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.00000001953125 mM +0.5 +2.8 compare
phage Ste41 +0.5 +1.6 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.6 +2.4 compare