Fitness data for b2761 in Escherichia coli BW25113

ygcB: conserved protein, member of DEAD box family (NCBI)
SEED: CRISPR-associated helicase Cas3

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.6 -4.3 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.6 -3.7 compare
stress LB Anaerobic with Phenazine ethosulfate 0.000125 mM -0.5 -3.8 compare
carbon source carbon source D-Glucose 0.25mM -0.5 -2.6 compare
stress LB Aerobic with Ramoplanin 0.000125 mM -0.5 -3.5 compare
predation 3 hr rep1_HD100_100fold_dilution -0.5 -3.9 compare
stress LB Aerobic with Novobiocin 0.0000625 mM -0.4 -3.4 compare
stress LB Aerobic with Nitrofurantoin 0.00003125 mM -0.4 -3.5 compare
mixed community Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.1X M9; outgrowth in LBwithKan -0.4 -3.6 compare
stress LB Aerobic with Ramoplanin 0.000125 mM -0.4 -3.1 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.4 -2.6 compare
stress LB Anaerobic with Benzethonium chloride 0.000015625 mM -0.4 -3.2 compare
stress LB Anaerobic with Phenazine ethosulfate 0.000125 mM -0.4 -3.1 compare
msc 22hr_MSC_rep1_highinoculum +0.4 +2.8 compare
phage Ste41 +0.4 +2.6 compare
phage RB68 +0.4 +3.3 compare
phage T7_phage 0.0015625 MOI TC2 +0.4 +2.7 compare
stress LB Aerobic with Irgasan 0.0000003125 mM +0.4 +3.3 compare
phage Ste41 +0.5 +3.4 compare
phage RB68 +0.6 +5.1 compare