Fitness data for b2727 in Escherichia coli BW25113

hypB: GTP hydrolase involved in nickel liganding into hydrogenases (NCBI)
SEED: [NiFe] hydrogenase nickel incorporation-associated protein HypB
KEGG: hydrogenase nickel incorporation protein HypB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress LB Anaerobic with Cephalothin 0.0000078125 mM -2.2 -5.2 compare
stress LB Anaerobic with Furaltadone 0.000015625 mM -1.5 -3.3 compare
stress LB Anaerobic with Tetracycline 0.0000003125 mM -1.2 -4.2 compare
stress LB Anaerobic with Chloramphenicol 0.000001953125 mM -1.2 -4.2 compare
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM -1.2 -4.4 compare
stress LB Anaerobic with Phenazine ethosulfate 0.000125 mM -1.0 -2.3 compare
stress LB Anaerobic Allura Red AC 250 uM -1.0 -4.9 compare
stress LB Anaerobic with Irgasan 0.000000625 mM -0.9 -2.7 compare
stress LB Anaerobic with Norfloxacin 0.0000000390625 mM -0.9 -3.0 compare
lb anaerobic no stress control LB anaerobic no stress control -0.8 -4.1 compare
stress LB Anaerobic with Sulfamonomethoxine 0.0000625 mM -0.8 -3.1 compare
lb LB, Anaerobic -0.8 -3.2 compare
carbon source Dodecanol (C) -0.8 -2.3 compare
control PBS_cage_2_mice _Feces_22 hr +0.8 +1.2 compare
phage Ste41 +0.8 +2.5 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.8 +1.9 compare
control PBS_cage_2_mouse_2_Cecum_40 hr +0.9 +1.5 compare
control PBS_cage_2_mouse_1_Cecum_40 hr +0.9 +1.2 compare
carbon source carbon source D-Mannose 5mM +0.9 +1.8 compare
motility inner cut, LB soft agar motility assay +1.3 +2.7 compare