Fitness data for b2365 in Escherichia coli BW25113

dsdX: predicted transporter (NCBI)
SEED: D-serine permease DsdX
KEGG: D-serine transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage N4_phage 0.00009375 MOI TC5 -0.6 -3.0 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.6 -2.0 compare
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.6 -2.1 compare
stress Ciprofloxacin Hydrochloride 0.000156 mM -0.5 -2.5 compare
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.5 -1.8 compare
stress Benzalkonium Chloride 0.004 mg/ml -0.4 -1.6 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.4 -1.9 compare
stress Cisplatin 0.05 mg/ml -0.4 -2.7 compare
stress Bacitracin 0.5 mg/ml +0.4 +2.8 compare
phage Phage_N4_cage_3_mouse_1_Cecum_40 hr +0.4 +2.0 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.4 +2.0 compare
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM +0.4 +3.1 compare
motility outer cut, LB soft agar motility assay +0.5 +1.9 compare
motility inner cut, LB soft agar motility assay +0.5 +2.3 compare
gfp_control GFP_control +0.6 +2.9 compare
phage T7_phage 0.0015625 MOI TC1 +0.6 +2.7 compare
carbon source D-Serine (C) +0.6 +1.6 compare
carbon source D-Serine (C) +0.8 +2.2 compare
nitrogen source D-Serine (N) +1.0 +2.8 compare
nitrogen source D-Serine (N) +1.0 +2.8 compare