Fitness data for b2140 in Escherichia coli BW25113

dusC: tRNA-dihydrouridine synthase C (NCBI)
SEED: tRNA-dihydrouridine synthase C (EC 1.-.-.-)
KEGG: tRNA-dihydrouridine synthase C

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -0.7 -2.7 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.6 -3.1 compare
phage T7_phage 0.00015625 MOI TC4 -0.6 -2.4 compare
carbon source carbon source D-Mannose 0.5mM -0.6 -1.7 compare
phage Phage_N4_cage_3_mice _Feces_16 hr -0.5 -2.7 compare
carbon source carbon source D-Glucose 1mM -0.5 -2.9 compare
phage Ste41 -0.4 -1.7 compare
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) -0.4 -2.7 compare
phage RB68 -0.4 -2.1 compare
no phage control Control_Tn1 -0.4 -2.4 compare
protonated/deuterated deuterated glucose in D2O +0.4 +2.6 compare
control PBS_cage_2_mouse_1_Cecum_40 hr +0.4 +1.1 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.4 +2.8 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.4 +2.1 compare
phage N4_phage 0.00009375 MOI TC4 +0.4 +1.8 compare
control PBS_cage_2_mice _Feces_22 hr +0.4 +1.2 compare
stress Benzalkonium Chloride 0.004 mg/ml +0.5 +2.4 compare
phage Papa dilution 10-1 cacl2 maltose +0.5 +3.1 compare
control PBS_cage_2_mouse_2_Cecum_40 hr +0.5 +1.4 compare
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +0.6 +2.4 compare