Fitness data for b1873 in Escherichia coli BW25113

torY: TMAO reductase III (TorYZ), cytochrome c-type subunit (NCBI)
SEED: Cytochrome c-type protein TorY
KEGG: trimethylamine-N-oxide reductase (cytochrome c) 2, cytochrome c-type subunit TorY

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.8 -1.9 compare
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.5 -1.6 compare
stress LB Aerobic with Benzethonium chloride 0.000015625 mM -0.5 -2.5 compare
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr -0.5 -1.6 compare
motility outer cut, LB soft agar motility assay -0.5 -1.8 compare
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.5 -1.9 compare
nitrogen source Cytidine (N) -0.5 -3.1 compare
phage T7_phage 0.0015625 MOI TC2 -0.5 -1.3 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -0.4 -1.8 compare
M9 Acetate 0.5% aerobic -0.4 -2.3 compare
plasmid transformation vcDART vector transformation; agar assay -0.4 -2.8 compare
M9 Acetate 0.5% aerobic -0.4 -2.4 compare
stress Cisplatin 0.05 mg/ml -0.4 -2.6 compare
nitrogen source Cytidine (N) -0.4 -2.7 compare
control PBS_cage_1_mouse_1_Cecum_40 hr +0.4 +1.3 compare
control PBS_cage_2_mouse_1_Cecum_40 hr +0.5 +1.6 compare
carbon source carbon source D-Glucose 5mM +0.6 +2.2 compare
carbon source carbon source D-Mannose 1mM +0.7 +2.1 compare
predation 6 hr rep1_HD100_10fold_dilution_grewON +0.8 +2.2 compare
stress Trimethoprim 0.005 mM +0.8 +3.0 compare