Fitness data for b1443 in Escherichia coli BW25113

ydcV: predicted spermidine/putrescine transporter subunit (NCBI)
SEED: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
KEGG: putative spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
motility outer cut, LB soft agar motility assay -1.2 -1.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.1 -1.6 compare
stress Trimethoprim 0.0025 mM -0.9 -2.6 compare
phage N4_phage 0.00009375 MOI TC1 -0.9 -2.7 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.9 -2.2 compare
phage N4_phage 0.00009375 MOI TC3 -0.9 -2.3 compare
carbon source carbon source D-Mannose 5mM +0.9 +1.7 compare
mzaabcde mzaABCDE +0.9 +3.0 compare
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.9 +3.7 compare
stress nitrite 10 mM +0.9 +2.3 compare
stress A22 0.08 mg/ml +1.0 +2.6 compare
phage RB68 +1.1 +2.4 compare
phage Ste41 +1.1 +2.1 compare
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +1.1 +4.2 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +1.2 +2.2 compare
phage Ste41 +1.2 +2.1 compare
stress octanol 0.08 vol% +1.2 +2.6 compare
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +1.3 +2.0 compare
phage RB68 +1.3 +4.3 compare
stress Trimethoprim 0.005 mM +1.6 +1.7 compare