Fitness data for b1400 in Escherichia coli BW25113

paaY: predicted hexapeptide repeat acetyltransferase (NCBI)
SEED: Phenylacetic acid degradation protein PaaY
KEGG: phenylacetic acid degradation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
stress octanol 0.08 vol% -3.8 -2.3 compare
phage N4_phage 0.00009375 MOI TC4 -2.5 -2.9 compare
phage RB68 -2.2 -2.6 compare
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM -2.0 -1.9 compare
plasmid transformation vcDART vector transformation; liquid outgrowth assay -2.0 -1.7 compare
stress LB Anaerobic with Amoxicillin 0.0000078125 mM -1.9 -1.8 compare
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -1.8 -1.7 compare
carbon source Guanosine 0.35306 mM (C) -1.7 -2.7 compare
phage N4_phage 0.0009375 MOI TC2 -1.7 -2.4 compare
phage N4_phage 0.009375 MOI TC1 -1.7 -2.4 compare
carbon source carbon source D-Glucose 0.25mM -1.6 -1.4 compare
motility outer cut, LB soft agar motility assay -1.5 -1.3 compare
stress LB Anaerobic with Nalidixic 0.00000195313 mM -1.4 -2.4 compare
phage TP4 -1.4 -1.7 compare
carbon source Ying_OrganicAcid7 rep A; time point 2 -1.3 -3.6 compare
stress nitrite 10 mM +1.4 +1.7 compare
stress Chlorite 1.25 mM +1.5 +1.9 compare
stress Doxycycline hyclate 0.001 mg/ml +1.6 +2.0 compare
stress Cephalothin 0.01 mg/ml +1.7 +2.2 compare
phage T7_phage 0.00015625 MOI TC3 +2.3 +4.1 compare