Fitness data for b1040 in Escherichia coli BW25113
csgD: DNA-binding transcriptional activator in two-component regulatory system (NCBI)
SEED: Transcriptional regulator CsgD for 2nd curli operon
KEGG: LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.8)
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| group | condition | fitness | t score | |
|---|---|---|---|---|
| carbon source | LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) | +3.8 | +10.3 | compare |
| carbon source | Succinic Acid (C) | +4.0 | +8.7 | compare |
| carbon source | LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) | +4.0 | +8.7 | compare |
| carbon source | 2'-Deoxycytidine (C) | +4.1 | +8.5 | compare |
| carbon source | LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) | +4.2 | +8.9 | compare |
| carbon source | 2'-Deoxycytidine (C) | +4.2 | +8.8 | compare |
| carbon source | Glycerol (C) | +4.3 | +10.5 | compare |
| carbon source | Glycerol (C) | +4.6 | +10.6 | compare |
| carbon source | D-Galactose (C) | +4.6 | +11.3 | compare |
| carbon source | Ying_Others16 rep A; time point 2 | +4.7 | +11.7 | compare |
| carbon source | D-Galactose (C) | +4.8 | +11.6 | compare |
| carbon source | Inosine (C) | +4.9 | +18.5 | compare |
| carbon source | LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) | +5.2 | +13.0 | compare |
| carbon source | Ying_Others16 rep B; time point 2 | +5.6 | +22.6 | compare |
| carbon source | propionate (C) | +6.6 | +16.9 | compare |
| carbon source | acetate (C) | +7.2 | +16.0 | compare |
| carbon source | Thymidine (C) | +7.2 | +13.9 | compare |
| carbon source | L-Proline (C) | +7.3 | +30.1 | compare |
| carbon source | Thymidine (C) | +7.7 | +30.9 | compare |
| carbon source | acetate (C) | +7.9 | +33.7 | compare |