Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_t10
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.6
stress R2A with Polymyxin B sulfate 0.002 mg/ml -4.5
pH Growth at pH7 and (C) D-Glucose -4.3
stress Growth with Chloride 200 mM -4.3
carbon source carbon source D-Glucose 55.5 mM -3.7
phage P. putida PUT 7 MOI 1 -3.5
stress R2A with Fusaric 240 ug/mL -3.3
nitrogen source Hippuric (N) -3.1
nitrogen source nitrogen source nitrate 5mM -3.0
pH Growth at pH6 and (C) Trisodium citrate -2.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.7
pH pH 8 -2.6
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.6
carbon source carbon source Bisabolene 48.9 mM -2.4
micoeukaryotes Tetrahymena sp., Mixed culture-2 -2.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3
carbon source Trisodium citrate (C) -2.3
carbon source Valerolactone (C) -2.1
r2a control with 0.2x vogels R2A control with 0.2X Vogels -2.1
carbon source L-Phenylalanine 5 mM (C) -2.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.0
pH pH 7 -1.9
pH D-Glucose (C) pH 6.5 -1.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.8
carbon source DL-3-Hydroxybutyric (C) -1.8
carbon source rac-3-Hydroxypentanoic Acid (C) -1.7
nitrogen source nitrite (N) +1.9
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +3.0
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PP_t10