Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5673
carbon source acetate (C) -0.8
stress Growth with Chloride 200 mM; with MOPS -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7
nitrogen source NAG (N); with MOPS -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6
carbon source Glutaric (C) -0.6
carbon source ferulate (C); with MOPS -0.6
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.6
nitrogen source nitrogen source nitrite 1mM -0.6
temperature Growth at 30C; with MOPS -0.5
carbon source D-Glucose (C) 2.5 mM -0.5
phage P. putida PUT10 MOI 10 -0.5
carbon source 3-Hydroxydecanoic (C) -0.5
carbon source D-Galacturonic Acid (C) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5
carbon source D-Fructose (C) -0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5
phage P. putida Sci small MOI 0.1 +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5
pH Growth at pH7 and (C) D-Glucose +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.5
stress Growth with Chloride 500 mM +0.6
phage P. putida Missley MOI 0.1 +0.6
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6
stress Growth with Chloride 500 mM; with MOPS +0.6
pH Growth at pH7 and (C) D-Glucose +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8
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PP_5673