Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5534
temperature	Growth at 25C	-1.5
carbon source	Tween 20 (C)	-0.9
pH	Growth at pH6 and (C) Trisodium citrate	-0.9
carbon source	ferulate (C); with MOPS	-0.9
phage	P. put South MOI 10	-0.8
no stress control	Growth with no stress	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7
temperature	Growth at 30C; with MOPS	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.7
pH	Valerolactone (C) pH 6.5	-0.6
pH	Growth at pH7 and (C) D-Glucose	-0.6
phage	P. putida PUT10 MOI 0.1	-0.6
temperature shift	Temperature shift 30_to_25; with MOPS	-0.6
carbon source	Acetate Carbon Source (5mM)	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.5
carbon source	Vanillin (C)	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	+0.5
temperature shift	Temperature shift 10_to_34; with MOPS	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	+0.6
carbon source	Rhamnogalacturonan - from potato (C)	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.6
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.6
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.6
phage	P. putida Sci Big MOI 0.1	+0.6
phage	P. putida PUT 7 MOI 1	+0.6
phage	P. putida Missley MOI 0.1	+1.0
phage	PUT 8 MOI 1	+1.0
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