Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5366
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4
temperature shift Temperature shift 30_to_21; with MOPS -0.4
carbon source D-Glucose (C); with MOPS -0.4
carbon source Crotonic (C) -0.4
carbon source Tween 20 (C) -0.4
stress Growth with Chloride 500 mM; with MOPS -0.3
nitrogen source Urea (N) -0.3
carbon source carbon source 3-O-methyl-glucose 50 mM -0.3
carbon source D-Glucose (C) -0.3
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.3
nitrogen source 2,6-diaminopimelic (N) -0.3
pH Growth at pH7 and (C) Trisodium citrate -0.3
temperature Growth at 30C; with MOPS -0.3
carbon source 1,2-Propanediol (C) -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3
pH Growth at pH6 and (C) D-Glucose +0.3
stress Butyrolactam 2 vol% +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3
carbon source L-Phenylalanine 5 mM (C) +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3
pH pH 9 +0.3
phage P. putida Missley MOI 0.1 +0.4
phage P. putida PUT 7 MOI 1 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4
nitrogen source Propiolactam (N) +0.6
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PP_5366