Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5359
temperature shift Temperature shift 30_to_21; with MOPS -3.1
nitrogen source nitrogen source nitrite 1mM -2.1
pH Growth at pH6 and (C) D-Glucose -2.1
carbon source D-Fructose (C) -1.7
pH Growth at pH6 and (C) Trisodium citrate -1.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.6
carbon source 4-Hydroxyvalerate (C) (40mM) -1.6
pH D-Glucose (C) pH 6.5 -1.6
carbon source Succinic Acid (C) -1.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.4
pH Valerolactone (C) pH 6.5 -1.4
nitrogen source Ammonium chloride (N); with MOPS -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.3
carbon source 2-Methylbutanoic (C) -1.3
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -1.2
carbon source carbon source 4-vinylphenol 0.01 mM -1.2
carbon source L-Leucine (C) -1.2
pH pH 9 +1.2
pH Valerolactone (C) pH 6.5 +1.2
stress Growth with Chloride 200 mM; with MOPS +1.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3
carbon source carbon source 2-Deoxy-D-glucose 100 mM +1.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4
carbon source Glutaric (C) +1.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.4
carbon source 3-Hydroxydecanoic (C) +1.8
nitrogen source Propandiamine (N) +1.8
nitrogen source D-2-Aminobutyric (N) +1.9
nitrogen source D-2-Aminobutyric (N) +2.7
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PP_5359