Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5354
temperature shift Temperature shift 30_to_4 -1.7
temperature shift Temperature shift 30_to_4 -1.6
temperature shift Temperature shift 30_to_4 -1.2
temperature shift Temperature shift 30_to_4; with MOPS -0.9
stress Geraniol 1 vol% -0.9
temperature shift Temperature shift 30_to_4; with MOPS -0.8
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7
carbon source L-Leucine (C) -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.6
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.6
nitrogen source D-2-Aminobutyric (N) -0.6
nitrogen source nitrite (N) -0.6
carbon source butyrate (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6
temperature shift Temperature shift 30_to_4; with MOPS -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
temperature Growth at 10C -0.5
pH LB 0.1x with 55.5 mM D-Glucose; pH 4.6 -0.5
carbon source Levulinic Acid (C) -0.5
nitrogen source Ammonium chloride (N) -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5
phage P. put PUT 10 MOI 10 +0.5
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.5
nitrogen source DL-2-Aminobutyric (N) +0.5
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PP_5354