Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_5314
phage P. putida PUT 7 MOI 1 -0.9
carbon source Trisodium citrate (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
nitrogen source NAG (N); with MOPS -0.5
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
nitrogen source D-2-Aminobutyric (N) -0.4
carbon source 2-Methylbutanoic (C) -0.4
carbon source Trisodium citrate 10 mM (C) -0.4
carbon source D-Mannose (C) -0.4
carbon source Delta-Decalactone (C) -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3
carbon source D-Lysine 10 mM (C) -0.3
no stress control Growth with no stress -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.3
carbon source D-Glucose (C) +0.3
temperature shift Temperature shift 10_to_25; with MOPS +0.3
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.3
carbon source BC Lignin Sorghum 20 vol% (C) +0.4
nitrogen source NAG (N); with MOPS +0.4
carbon source 4-Aminobutyric 10 mM (C) +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
carbon source Myristic (C) +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.4
carbon source 3-methyl-1-butanol (C) +1.2
carbon source 3-methyl-1-butanol (C) +1.2
carbon source Lignin Monomers (C) +1.3
carbon source 3-methyl-1-butanol 0.1 vol% (C) +3.9
remove
PP_5314