Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5299
nitrogen source	Putrescine (N)	-1.1
nitrogen source	Propandiamine (N)	-1.0
nitrogen source	spermidine (N)	-0.8
nitrogen source	D-2-Aminobutyric (N)	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7
nitrogen source	Putrescine (N)	-0.7
nitrogen source	spermidine (N)	-0.6
carbon source	1,3-Butandiol (C)	-0.6
nitrogen source	Propandiamine (N)	-0.6
phage	P. put PUT 10 MOI 0.1	-0.4
carbon source	L-tyrosine 5 mM (C)	+0.4
temperature shift	Temperature shift 30_to_4; with MOPS	+0.4
carbon source	Hexanoic (C)	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.4
temperature shift	Temperature shift 10_to_25; with MOPS	+0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.4
carbon source	D-Glucose (C)	+0.4
carbon source	L-Leucine (C)	+0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	+0.4
pH	Growth at pH7 and (C) Trisodium citrate	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.5
carbon source	ferulate (C); with MOPS	+0.5
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.5
pH	Growth at pH7 and (C) Trisodium citrate	+0.5
nitrogen source	NAG (N); with MOPS	+0.5
pH	Growth at pH7 and (C) D-Glucose	+0.5
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	+0.6
nitrogen source	nitrogen source nitrate 5mM	+0.7
temperature shift	Temperature shift 10_to_25; with MOPS	+0.7
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