Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5274
carbon source Tween 20 (C) -7.3
carbon source D-Glucose (C) -6.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.3
nitrogen source nitrate (N) -3.0
temperature Growth at 30C -2.8
temperature shift Temperature shift 30_to_25 -2.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.0
carbon source L-Glutamic (C) -1.9
carbon source L-Phenylalanine 5 mM (C) -1.9
pH Growth at pH7 and (C) Trisodium citrate -1.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.7
carbon source L-Leucine (C) -1.7
carbon source 4-Methyl-2-oxopentanoic (C) -1.6
stress NaCl stress 250 mM -1.6
carbon source 2,3-Butanediol (C) -1.5
temperature shift Temperature shift 30_to_25; with MOPS -1.5
pH D-Glucose (C) pH 6.5 -1.5
phage P. putida Missley MOI 0.1 -1.5
carbon source 4-Methyl-2-oxopentanoic (C) -1.4
carbon source 4-Aminobutyric 10 mM (C) -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.4
carbon source L-Leucine (C) -1.4
nitrogen source D-2-Aminobutyric (N) -1.4
pH Valerolactone (C) pH 6.5 +1.4
nitrogen source Propiolactam (N) +1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.8
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PP_5274