Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5260
carbon source L-Lysine (C) -7.4
carbon source L-Lysine (C) -6.1
carbon source L-Lysine 10 mM (C) -6.1
carbon source L-Lysine (C) -5.2
nitrogen source L-Pipecolic Acid (N) -3.7
carbon source D-Lysine 10 mM (C) -3.6
nitrogen source D-Lysine (N) -3.1
nitrogen source L-Pipecolic Acid (N) -2.8
carbon source D-Lysine 10 mM (C) -2.4
nitrogen source D-Lysine (N) -2.2
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.5
nitrogen source L-Lysine (N) -1.3
phage P. putida PUT 7 MOI 1 -1.3
nitrogen source L-Lysine (N) -1.1
nitrogen source Propandiamine (N) -0.9
carbon source Cholinium lysinate (C) -0.9
micoeukaryotes C.elegans, mixed culture-1 -0.8
carbon source DL-2-Aminoadipic 10 mM (C) -0.8
temperature Growth at 30C -0.7
pH Growth at pH9 and (C) Trisodium citrate -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6
nitrogen source NAG (N); with MOPS -0.6
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.6
carbon source D-Glucose (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6
nitrogen source D-2-Aminobutyric (N) +0.8
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PP_5260