Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5258
carbon source L-Lysine (C) -5.7
carbon source L-Lysine (C) -5.5
carbon source L-Lysine (C) -5.1
carbon source L-Lysine 10 mM (C) -4.6
carbon source D-Lysine 10 mM (C) -4.5
carbon source D-Lysine 10 mM (C) -4.2
nitrogen source L-Pipecolic Acid (N) -3.0
nitrogen source D-Lysine (N) -2.6
nitrogen source L-Pipecolic Acid (N) -2.4
phage P. putida Sci small MOI 0.1 -2.2
nitrogen source D-Lysine (N) -2.0
micoeukaryotes C.elegans, mixed culture-1 -1.5
micoeukaryotes C.elegans, mixed culture-2 -1.4
nitrogen source Propandiamine (N) -1.3
carbon source Cholinium lysinate (C) -1.2
nitrogen source nitrate (N) -1.0
nitrogen source Propandiamine (N) -1.0
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.0
nitrogen source L-Lysine (N) -0.9
nitrogen source L-Lysine (N) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9
carbon source Crotonic (C) -0.8
phage P. put South MOI 0.1 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8
temperature shift Temperature shift 30_to_25 -0.8
pH pH 5 -0.8
pH pH 8 -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7
carbon source D-Glucose (C) +0.8
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PP_5258