Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5253
temperature	Growth at 25C	-6.3
pH	Growth at pH8 and (C) D-Glucose	-2.8
nitrogen source	nitrate (N)	-2.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-2.1
carbon source	ferulate (C); with MOPS	-2.1
temperature shift	Temperature shift 10_to_30; with MOPS	-1.9
carbon source	Tween 20 (C)	-1.9
carbon source	L-Lysine 10 mM (C)	-1.7
stress	Growth with Chloride 500 mM; with MOPS	-1.5
pH	Growth at pH6 and (C) Trisodium citrate	-1.5
nitrogen source	NAG (N); with MOPS	-1.3
stress	R2A with Fusaric 480 ug/mL	-1.3
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-1.3
carbon source	butyrate (C)	-1.2
pH	Growth at pH6 and (C) Trisodium citrate	-1.2
temperature shift	Temperature shift 10_to_34; with MOPS	-1.2
stress	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-1.2
carbon source	4-Methyl-2-oxopentanoic (C)	-1.2
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-1.1
carbon source	Lauric (C)	-1.1
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	+1.1
carbon source	L-Glutamine (C)	+1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.3
nitrogen source	nitrate (N)	+1.3
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+1.4
nitrogen source	Propiolactam (N)	+1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+2.3
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