Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5216
nitrogen source nitrogen source nitrite 0.5mM -4.2
carbon source Hexanoic (C) -3.5
r2a control R2A control -3.4
nitrogen source D-2-Aminobutyric (N) -3.2
micoeukaryotes C.elegans, mixed culture-2 -3.1
nitrogen source nitrogen source nitrate 20mM -2.9
micoeukaryotes Tetrahymena sp., Mixed culture-2 -2.9
carbon source L-Lysine (C) -2.9
carbon source p-Coumaric (C) -2.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -2.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.7
phage P. put South MOI 10 -2.7
carbon source Glucose (C) (20mM) -2.6
supernatant Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x and Ferric chloride 1 uM -2.5
carbon source 3-Hydroxypropionate (C) -2.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.5
carbon source Delta-Decalactone (C) -2.4
carbon source Vanillin (C) -2.4
carbon source Vanillin (C) -2.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.3
stress R2A with Fusaric 240 ug/mL -2.3
carbon source Phenylacetic (C) -2.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -2.2
nitrogen source D-2-Aminobutyric (N) -2.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.2
stress R2A with Fusaric 240 ug/mL -2.2
carbon source Vanillic Acid (C) -2.2
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.2
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PP_5216