Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5184
nitrogen source	Propandiamine (N)	-4.7
nitrogen source	Propandiamine (N)	-4.2
nitrogen source	Putrescine (N)	-3.2
nitrogen source	Putrescine (N)	-2.9
nitrogen source	NAG (N); with MOPS	-2.2
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-2.2
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-2.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.7
stress	Growth with Chloride 500 mM; with MOPS	-1.7
nitrogen source	Putrescine (N)	-1.3
pH	Valerolactone (C) pH 6.5	-1.2
nitrogen source	NAG (N); with MOPS	-1.1
phage	P. putida Sci Big MOI 0.1	-1.1
carbon source	L-Arginine (C)	-1.1
stress	Growth with Chloride 500 mM	-1.0
stress	Growth with Chloride 500 mM; with MOPS	-0.9
carbon source	1,3-Butandiol (C)	-0.9
carbon source	L-Lysine 10 mM (C)	-0.9
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.8
nitrogen source	spermidine (N)	-0.8
stress	Growth with Chloride 500 mM; with MOPS	-0.8
stress	Growth with Chloride 500 mM	-0.8
pH	LB 0.1x with 55.5 mM D-Glucose; pH 4.6	-0.8
pH	Valerolactone (C) pH 6.5	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.8
carbon source	Trisodium citrate (C)	-0.8
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.8
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
stress	3-methyl-1-butanol 0.4 vol%	+1.1
nitrogen source	D-2-Aminobutyric (N)	+1.3
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