Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5183
nitrogen source	D-2-Aminobutyric (N)	-2.8
nitrogen source	spermidine (N)	-2.6
nitrogen source	spermidine (N)	-2.4
nitrogen source	D-2-Aminobutyric (N)	-2.3
nitrogen source	DL-2-Aminobutyric (N)	-1.5
nitrogen source	DL-2-Aminobutyric (N)	-1.5
stress	Growth with Chloride 500 mM	-1.2
stress	Growth with Chloride 500 mM; with MOPS	-1.1
pH	LB 0.1x with 55.5 mM D-Glucose; pH 4.6	-1.1
temperature shift	Temperature shift 30_to_21; with MOPS	-1.0
nitrogen source	1,6-Hexanediamine (N)	-0.9
temperature	LB_noSalt 37C	-0.9
carbon source	Delta-Nonalactone (C)	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.9
nitrogen source	Cadaverine (N)	-0.9
temperature	LB 37C	-0.8
stress	Growth with Chloride 500 mM; with MOPS	-0.8
temperature	LB_noSalt 37C	-0.8
nitrogen source	Caprolactam (N)	-0.8
temperature shift	Temperature shift 30_to_21	-0.8
carbon source	Levulinic Acid (C)	-0.8
r2a control	R2A control	-0.8
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.8
nitrogen source	Caprolactam (N)	-0.7
carbon source	L-tyrosine 5 mM (C)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.8
carbon source	L-Valine (C)	+0.8
carbon source	L-Valine (C)	+0.9
micoeukaryotes	Acanthamoeba sp., muxed culture-2	+1.0
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