Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5147
nitrogen source	D-2-Aminobutyric (N)	-0.6
carbon source	carbon source 4-vinylphenol 0.1 mM	-0.6
pH	pH 4	-0.6
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	-0.5
pH	Growth at pH6 and (C) D-Glucose	-0.5
carbon source	Acetate Carbon Source (20mM)	-0.5
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
carbon source	Tween 20 (C)	-0.5
carbon source	3-Methyl-2-Oxobutanoic Acid (C)	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.4
carbon source	Acetate Carbon Source (20mM)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
carbon source	Acetate Carbon Source (5mM)	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.4
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.4
nitrogen source	D-2-Aminobutyric (N)	-0.4
nitrogen source	NAG (N); with MOPS	-0.4
carbon source	Ethyl decanoate and D-Glucose (C)s	-0.4
pH	pH 6	-0.4
pH	pH 5	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.4
carbon source	L-Leucine (C)	-0.4
carbon source	D-Glucose (C); with MOPS	+0.4
no stress control	Growth with no stress	+0.4
nitrogen source	no extra (N); with MOPS	+0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
temperature shift	Temperature shift 30_to_34; with MOPS	+0.4
temperature shift	Temperature shift 30_to_25	+0.5
nitrogen source	Ammonium chloride (N)	+0.5
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