Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5137
pH Growth at pH6 and (C) Trisodium citrate -1.1
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.8
carbon source D-Glucose (C) -0.8
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8
carbon source 1,3-Butandiol (C) -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7
temperature Growth at 25C -0.7
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.7
phage P. putida Sci small MOI 0.1 -0.7
nitrogen source nitrogen source nitrite 1mM -0.6
temperature Growth at 25C; with MOPS -0.6
nitrogen source 2,6-diaminopimelic (N) -0.6
nitrogen source nitrogen source nitrite 0.5mM -0.5
stress Growth with Chloride 500 mM; with MOPS -0.5
temperature shift Temperature shift 10_to_21; with MOPS -0.5
temperature shift Temperature shift 30_to_10; with MOPS -0.5
temperature shift Temperature shift 10_to_30; with MOPS -0.5
nitrogen source Cytosine (N) -0.5
carbon source Crotonic (C) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5
pH pH 8 +0.6
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.6
pH pH 4 +0.6
nitrogen source D-2-Aminobutyric (N) +0.6
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6
nitrogen source D-2-Aminobutyric (N) +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
carbon source carbon source 3-O-methyl-glucose 50 mM +0.8
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PP_5137