Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5133
nitrogen source	NAG (N); with MOPS	-1.0
nitrogen source	nitrogen source nitrite 1mM	-0.8
nitrogen source	NAG (N); with MOPS	-0.7
phage	P. putida Sci small MOI 0.1	-0.7
pH	D-Glucose (C) pH 6	-0.6
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.6
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-0.6
carbon source	Valerolactone (C)	-0.6
carbon source	Tween 20 (C)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	-0.5
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	+0.5
r2a control with 0.2% methanol	R2A control with 0.2% methanol	+0.5
nitrogen source	Propandiamine (N)	+0.5
pH	Growth at pH6 and (C) Trisodium citrate	+0.5
pH	Growth at pH6 and (C) D-Glucose	+0.5
carbon source	ferulate (C); with MOPS	+0.6
pH	Growth at pH8 and (C) D-Glucose	+0.6
temperature shift	Temperature shift 10_to_34; with MOPS	+0.6
stress	R2A with Fusaric 480 ug/mL	+0.6
stress	Growth with Chloride 200 mM; with MOPS	+0.6
nitrogen source	Ammonium chloride (N)	+0.6
temperature	Growth at 25C; with MOPS	+0.6
carbon source	D-Glucose (C); with MOPS	+0.6
pH	Growth at pH8 and (C) Trisodium citrate	+0.7
temperature shift	Temperature shift 30_to_25; with MOPS	+0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.8
pH	Growth at pH6 and (C) D-Glucose	+0.9
nitrogen source	D-2-Aminobutyric (N)	+1.3
		remove PP_5133