Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5127
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.4
carbon source	Tween 20 (C)	-1.3
phage	P. putida Sci small MOI 0.1	-1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.9
stress	Growth with Chloride 200 mM	-0.9
carbon source	D-Glucose (C); with MOPS	-0.8
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.7
stress	Growth with Chloride 500 mM; with MOPS	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.7
pH	Growth at pH9 and (C) Trisodium citrate	-0.7
carbon source	Tween 20 (C)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
no stress control	Growth with no stress	-0.6
pH	Growth at pH6 and (C) Trisodium citrate	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.6
temperature shift	Temperature shift 30_to_10	-0.6
nitrogen source	Ammonium chloride (N)	-0.6
temperature shift	Temperature shift 10_to_30; with MOPS	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
carbon source	Levulinic Acid (C)	+0.6
stress	MOPS minimal media_Glucose20mM with Lithium chloride 200 mM	+0.6
pH	Growth at pH7 and (C) Trisodium citrate	+0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
nitrogen source	NAG (N); with MOPS	+0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.7
nitrogen source	nitrogen source nitrate 5mM	+0.7
nitrogen source	nitrogen source nitrite 0.5mM	+0.7
nitrogen source	D-2-Aminobutyric (N)	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
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