Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_5118
carbon source Delta-Nonalactone (C) -0.8
phage P. putida Sci Big MOI 0.1 -0.7
pH pH 7 -0.7
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.6
micoeukaryotes C.elegans, mixed culture-1 -0.6
carbon source carbon source 3-O-methyl-glucose 10 mM -0.6
carbon source carbon source 3-O-methyl-glucose 50 mM -0.6
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5
nitrogen source no extra (N); with MOPS -0.5
temperature shift Temperature shift 30_to_4; with MOPS -0.5
phage P. putida Sci small MOI 0.1 -0.5
carbon source ferulate (C); with MOPS -0.5
stress R2A with Fusaric 240 ug/mL -0.5
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.5
carbon source L-Lysine (C) -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.5
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
carbon source Hexanoic (C) -0.4
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.4
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5
phage PUT 8 MOI 1 +0.7
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PP_5118