Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5109
carbon source Delta-Nonalactone (C) -4.8
carbon source Delta-Decalactone (C) -2.6
carbon source Delta-Decalactone (C) -2.3
stress 1-Pentanol 0.3 vol% -1.6
carbon source Decanoic (C) -1.5
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -1.3
nitrogen source Propandiamine (N) -1.3
mixed community control Putida_ML5X alone -1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1
nitrogen source Propandiamine (N) -1.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.1
carbon source 2,3-Butanediol (C) -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9
stress 3-methyl-1-butanol 0.4 vol% -0.9
carbon source 3-Hydroxydecanoic (C) -0.9
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.9
carbon source ferulate (C); with MOPS +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0
carbon source carbon source D-Glucose 55.5 mM +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1
carbon source ferulate (C); with MOPS +1.1
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PP_5109