Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5100
phage	P. put South MOI 10	-2.7
carbon source	ferulate (C); with MOPS	-2.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-2.2
phage	P. putida Sci small MOI 0.1	-1.9
phage	P. putida PUT10 MOI 10	-1.9
r2a control	R2A control	-1.8
phage	P. put South MOI 0.1	-1.8
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-1.7
phage	PUT 8 MOI 1	-1.7
temperature	Growth at 25C	-1.7
no stress control	Growth with no stress	-1.7
pH	Growth at pH6 and (C) Trisodium citrate	-1.7
phage	P. put South MOI 1	-1.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-1.6
phage	P. put PUT 10 MOI 1	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-1.6
phage	P. putida South MOI 10	-1.4
phage	P. putida PUT10 MOI 0.1	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.4
phage	P. putida South MOI 1	-1.3
pH	Valerolactone (C) pH 6.5	-1.3
phage	P. put PUT 10 MOI 10	-1.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-1.3
nitrogen source	NAG (N)	-1.3
carbon source	D-Glucose (C)	-1.3
phage	P. putida PUT 7 MOI 1	+1.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.3
pH	pH 6	+1.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+3.1
		remove PP_5100