Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5099
carbon source Valerolactone (C) -1.5
carbon source carbon source 3-O-methyl-glucose 50 mM -1.2
pH pH 7 -1.2
carbon source carbon source D-Glucose 55.5 mM -1.0
pH Valerolactone (C) pH 6.5 -0.8
phage P. put South MOI 10 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
phage P. putida South MOI 10 -0.7
phage P. putida Missley MOI 0.1 -0.7
phage P. putida PUT10 MOI 10 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7
carbon source carbon source 4-vinylphenol 0.01 mM -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7
phage P. put PUT 10 MOI 0.1 -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6
pH pH 6 -0.6
phage P. putida South MOI 1 -0.6
temperature shift Temperature shift 10_to_30; with MOPS -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6
phage P. put South MOI 0.1 -0.6
carbon source D-Glucaric (C) -0.6
phage P. put PUT 10 MOI 1 -0.6
pH D-Glucose (C) pH 7.5 -0.6
phage P. put South MOI 1 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5
carbon source ferulate (C); with MOPS +0.5
carbon source 4-Aminobutyric 10 mM (C) +0.6
carbon source D-Glucose (C) with 20AA_mix_minus_Cys +0.7
temperature shift Temperature shift 10_to_25; with MOPS +0.7
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PP_5099