Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5077
dilutelb	LB 0.1x with 55.5 mM D-Glucose	-3.5
supernatant	LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter	-2.7
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-2.2
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-1.7
dilutelb	LB 0.1x with 55.5 mM D-Glucose	-1.5
micoeukaryotes	C.elegans, mixed culture-1	-1.1
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-1.0
micoeukaryotes	Acanthamoeba sp., muxed culture-1	-1.0
phage	P. putida Sci small MOI 0.1	-1.0
carbon source	2-Methylbutanoic (C)	-1.0
pH	pH 9	-1.0
carbon source	Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB	-0.9
carbon source	ferulate (C); with MOPS	-0.9
pH	pH 5	-0.9
carbon source	L-tyrosine 5 mM (C)	-0.8
pH	pH 8	-0.8
carbon source	carbon source Bisabolol 45 mM	-0.8
carbon source	carbon source 4-vinylphenol 0.1 mM	-0.7
carbon source	Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB	-0.7
pH	LB 0.1x with 55.5 mM D-Glucose; pH 4.6	-0.7
nitrogen source	no extra (N); with MOPS	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
pH	pH 6	-0.7
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6
nitrogen source	D-2-Aminobutyric (N)	+0.7
nitrogen source	D-2-Aminobutyric (N)	+0.7
carbon source	Delta-Nonalactone (C)	+0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
carbon source	Delta-Decalactone (C)	+0.9
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