Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_5027
pH	Growth at pH7 and (C) D-Glucose	-7.1
nitrogen source	Urea (N); with MOPS	-6.8
carbon source	ferulate (C); with MOPS	-4.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-4.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-3.7
nitrogen source	Ammonium chloride (N); with MOPS	-3.2
carbon source	D-Glucose (C)	-3.2
carbon source	D-Glucose (C); with MOPS	-3.2
nitrogen source	Urea (N)	-3.0
pH	Growth at pH8 and (C) D-Glucose	-2.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.8
nitrogen source	2,6-diaminopimelic (N)	-2.7
temperature shift	Temperature shift 30_to_25; with MOPS	-2.6
nitrogen source	nitrate (N)	-2.4
temperature shift	Temperature shift 10_to_34; with MOPS	-2.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-2.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.2
no stress control	Growth with no stress	-2.2
pH	Growth at pH6 and (C) Trisodium citrate	-2.1
pH	Growth at pH6 and (C) D-Glucose	-2.0
carbon source	ferulate (C); with MOPS	-2.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-1.9
temperature	Growth at 34C	-1.9
nitrogen source	NAG (N); with MOPS	-1.9
carbon source	ferulate (C); with MOPS	-1.9
nitrogen source	nitrogen source nitrite 1mM	-1.9
temperature shift	Temperature shift 30_to_21; with MOPS	-1.8
carbon source	carbon source D-Glucose 55.5 mM	-1.8
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	-1.8
pH	pH 8	-1.8
		remove PP_5027