Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_5004
nitrogen source 2,6-diaminopimelic (N) -0.9
carbon source Butyl stearate (C) -0.7
carbon source Delta-Nonalactone (C) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
carbon source Butyl stearate (C) -0.6
carbon source 1,3-Butandiol (C) -0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
phage P. putida PUT 7 MOI 1 -0.5
carbon source ferulate (C); with MOPS -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5
temperature shift Temperature shift 10_to_25; with MOPS -0.5
carbon source carbon source Bisabolene 48.9 mM +0.4
carbon source Nonanoic (C) +0.4
carbon source Heptanoic (C) +0.4
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.4
carbon source L-tyrosine 5 mM (C) +0.5
pH D-Glucose (C) pH 6 +0.5
carbon source carbon source 4-vinylphenol 0.01 mM +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
pH Growth at pH6 and (C) D-Glucose +0.5
carbon source Decanoic (C) +0.5
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5
carbon source Octanoic (C) +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
nitrogen source nitrate (N) +0.6
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.6
carbon source Octanoic (C) +0.6
carbon source Delta-Dodecalactone (C) +0.6
carbon source Delta-Dodecalactone (C) +0.9
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PP_5004