Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_4980
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.6
phage	P. putida PUT10 MOI 1	-1.6
carbon source	carbon source Glycerol 108.6 mM	-1.5
phage	P. putida Missley MOI 0.1	-1.5
phage	P. putida PUT10 MOI 1	-1.4
carbon source	carbon source D-Glucose 55.5 mM	-1.4
temperature shift	Temperature shift 30_to_4; with MOPS	-1.3
temperature shift	Temperature shift 30_to_4; with MOPS	-1.3
phage	P. putida PUT10 MOI 0.1	-1.3
phage	P. putida PUT10 MOI 10	-1.2
phage	P. put PUT 10 MOI 0.1	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
phage	P. putida South MOI 0.1	-1.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-1.1
phage	PUT8 MOI 0.1	-1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-1.1
phage	P. putida South MOI 1	-1.1
nitrogen source	DL-2-Aminobutyric (N)	+1.1
nitrogen source	DL-2-Aminobutyric (N)	+1.1
carbon source	L-Leucine (C)	+1.3
carbon source	2,3-Butanediol (C)	+1.3
stress	Geraniol 1 vol%	+1.4
		remove PP_4980